Sequencing for MinkeWhale-00 Genome by Illumina HiSeq2000 with Insert... - SRA

SRX310157: Sequencing for MinkeWhale-00 Genome by Illumina HiSeq2000 with Insert Size 2kb
1 ILLUMINA (Illumina HiSeq 2000) run: 420.6M spots, 41.2G bases, 26.1Gb downloads

Design: Whole genomic DNA extracted from the minke whale sample was sequenced using an Illumina HiSeq2000 for minke whale genome de novo assembly. The mate pair library of ~2kb DNA fragments was constructed and sequenced.

Submitted by: Korea Institute of Ocean Science and Technology

Study: Cetacea Genome sequencing and assembly

PRJNA72723 • SRP025154 • All experiments • All runs

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To provide a full genome sequence of the most abundant whale species in the world. It will provide a genetic diversity of the species and will help us understand how whales adapt to environmental stresses. Also, as whales are long-living, the genome comparisons may provide clues to their longevity. Finally, this study will help us figure out the evolution and phylogeny of whale.

Sample: General Sample for Balaenoptera acutorostrata of which PGI sample id is MinkeWhale-00

SAMN02192642 • SRS439234 • All experiments • All runs

Organism: Balaenoptera acutorostrata scammoni

Library:

Name: Genome_of_Insert_Size_2kb

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward50 reverse

Runs: 1 run, 420.6M spots, 41.2G bases, 26.1Gb

Run	# of Spots	# of Bases	Size	Published
SRR908213	420,629,549	41.2G	26.1Gb	2015-07-22

ID:: 433770

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